Publikacje

Rok:   2018   2017   2016   2015   2014   2013   2012   2011   2010   2009

1. Anna Papiez, Omid Azimzadeh, Tamara Azizova, Maria Moseeva, Natasa Anastasov, Jan Smida, Soile Tapio, and Joanna Polanska: Integrative multi-omics study for validation of mechanisms in radiation-induced ischemic heart disease in Mayak workers, 2018, PLOS ONE 13(12): e0209626.

2. Weiner J, Maertzdorf J, Sutherland J.S., Duffy F.J., Thompson E., Suliman S., McEwen G., Thiel B., Parida S.K., Zyla J., Hanekom W.A., Mohney R.P., Boom W.H., Mayanja-Kizza H., Howe R., Dockrell H.M., Ottenhoff T.H.M, Scriba T.J., Zak D.E., Walzl G., Kaufmann S.H.E & The GC6-74 consortium: Metabolite changes in blood predict the onset of tuberculosis. Nature Communications. 9(1): 5208 (2018)

3. Papiez A, Marczyk M, Polanska J, Polanski A: BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm. Bioinformatics, 2018, doi:10.1093/bioinformatics/bty900

4. Marczyk M, Jaksik R, Polanski A, Polanska J: GaMRed – adaptive filtering of high-throughput biological data. IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2018, doi: 10.1109/TCBB.2018.2858825

5. Corina Cuceu, Bruno Colicchio, Eric Jeandidier, Steffen Junker, Grace Shim, François Plassa, Justyna Mika, Monika Frenzel, Mustafa Al Jawhari, William M. Hempel, Grainne O'brien, Aude Lenain, Luc Morat, Théodore Girinsky, Alain Dieterlen, Joanna Polanska, Christophe Badie, Patrice Carde, Radhia M'kacher: Independent mechanisms lead to genomic instability in Hodgkin lymphoma: Microsatellite or chromosomal instability related to telomere end fusion or DNA repair defects. Cancers (Basel), 2018, 10(7): E233. doi:10.3390/cancers10070233.

6. Rucinski S., Pigulski A., Popowicz Adam, Kuschnig R., Kozlowski Sz., Moffat A., Pavlovski K., Handler G., Pablo H., Wade G. and Weiss W.. LIGHT-CURVE INSTABILITIES OF β LYRAE OBSERVED BY THE BRITE SATELLITES, 2018. ASTROPHYSICAL JOURNAL, vol. (accepted)

7. Ewa Rusak, Anna Rotarska-Mizera, Piotr Adamczyk, Bogdan Mazur, Joanna Polanska and Agata Chobot: Markers of anemia in children with type 1 diabetes, Journal of Diabetes Research, 2018, ID 5184354, 7 pages, https://doi.org/10.1155/2018/5184354

8. Robert Dziedzic, Tomasz Marjański, Franciszek Binczyk, Joanna Polanska, Wioletta Sawicka, Witold Rzyman, Favourable outcomes in early-stage non-small cell lung cancer patients operated by VATS - a propensity score-matched analysis. European Journal of Cardio-Thoracic Surgery, Epub 2018, March 14, doi: 10.1093/ejcts/ezy101

9. Adam Popowicz, 'Analysis of Dark Current in BRITE Nanostellite CCD Sensors', Sensors 2018, 18(2), 479; doi: 10.3390/s18020479

10. Agnieszka Cecotka, Joanna Polanska: Region-specific methylation profiling in acute myeloid leukemia. Interdisciplinary Sciences - Computational Life Sciences, 2018, 10(1):33-42, doi: 10.1007/s12539-018-0285-4

11. Anna Wojakowska, Laura M. Cole, Mykola Chekan, Katarzyna Bednarczyk, Magdalena Maksymiak, Małgorzata Oczko-Wojciechowska, Barbara Jarzab, Malcolm R. Clench, Joanna Polanska, Monika Pietrowska, Piotr Widlak: Discrimination of papillary thyroid cancer from non-cancerous thyroid tissue based on lipid profiling by mass spectrometry imaging, Endokrynol Pol 2018; 69 (1): 2–8, DOI: 10.5603/EP.a2018.0003

12. BRITe-Constellation reveals evidence for pulsations in the enigmatic binary η Carinae, Monthly Notices of the Royal Astronomical Society, Noe Richardson et al. (including Adam Popowicz) 2018 (accepted)

13. Anna Walaszczyk, Katarzyna Szołtysek, Karol Jelonek, Joanna Polanska, Wolfgang Dörr, Julia Haagen, Piotr Widłak, Dorota Gabryś: Heart irradiation reduces microvascular density and accumulation of HSPA1 in mice, Strahlentherapie und Onkologie, 2018, 194:235-242, Epub 23rd October 2017, doi:10.1007/s00066-017-1220-z

14. K. Radlak, M. Frackiewicz, H. Palus, B. Smolka, Finger joint synovitis detection in ultrasound images, Bulletin of the Polish Academy of Sciences: Technical Sciences (in press, JCR)

15. Baade D., Pigulski A., Rivinius Th., Carciofi A., Panoglou D, Ghoreyshi M., Handler G., Kuschnig R., Moffat A., Pablo H., Popowicz Adam, Wade G., Weiss W. and Zwintz K.. Short-term variability and mass loss in Be stars III. BRITE and SMEI satellite photometry of 28 Cygni, 2018. ASTRONOMY & ASTROPHYSICS, vol. Volume 610, no. A70

16. Polanski A, Marczyk M, Pietrowska M, Widlak P, Polanska J: Initializing the EM Algorithm for Univariate Gaussian, Multi-Component, Heteroscedastic Mixture Models by Dynamic Programming Partitions, International Journal of Computational Methods, 2018, 15(3): 1850012 (21 pages), doi: 10.1142/S0219876218500123

17. Chobot Agata, Ewa Rusak, Janet Wenzlau, Howard Davidson, Piotr Adamczyk, Agnieszka Krzywicka, Bogdan Mazur, Joanna Polanska, Marian Rewers: ATP4A autoimmunity in pediatric patients with type 1 diabetes and its relationship to blood count, iron metabolism and vitamin B12. Pediatric Diabetes, 2018, 19:80-84, Epub April 12, 2017, doi: 10.1111/pedi.12528

18. Anna Glodek, Joanna Polanska: Method for mass spectrometry spectrum deisotoping based on fuzzy inference systems. Mathematica Applicanda, 46(1):77-86, 2018 oraz XXIV Krajowa Konferencja Zastosowań Matematyki w Biologii i Medycynie, 3-7 września 2018, Zakopane-Kościelisko. doi: 10.14708/ma.v46i1.6384

19. Popowicz Adam. PSF photometry for BRITE nano-satellite mission, 2018. SPIE Telescopes+Instrumentation 2018, 10/06/2018-16/06/2018, Austin, USA.

20. Fernando Angeles, Orlov Valeri and Popowicz Adam. Fast Photometry of Stars, 2018. SPIE Telescopes+Instrumentation 2018, 10/06/2018-16/06/2018, Austin, USA.

21. Joanna Tobiasz, Najla Al-Harbi, Sara Bin Judia, Salma Majid, Ghazi Alsbeih, and Joanna Polanska: Are Radiosensitive and Regular Response Cells Homogeneous in Their Correlations Between Copy Number State and Surviving Fraction After Irradiation? 6th International Work-Conference on Bioinformatics and Biomedical Engineering, IWBBIO 2018, April 25-27, 2018, Granada, Spain. Lecture Notes in Bioinformatics, 10813:197-208, doi: 10.1007/978-3-319-78723-7_17

22. Krawczyk A, Polanska J: Comparative analysis of microRNA-target gene interaction prediction algorithms based on integrated p-value calculation. Advances in Intelligent Systems and Computing, 2018, 659:137-143, International Conference on Man-Machine Interactions, ICMMI 2017, October 3-6, 2017, Kraków

23. Qing T, Marczyk M, Wali V, Gunasekharan V, Patwardhan G, Pusztai L, Hatzis C: Pathway level complementarity of germline and somatic events in breast cancer. Proccedings of San Antonio Breast Cancer Symposium, San Antonio, TX, USA, December 4-8, 2018

24. Marczyk M, Fu C, Lau R, Du L, Trevarton AJ, Sinn BV, Gould RE, Symmans WF, Hatzis C: Pre-analytical effects of FFPE extraction methods on targeted and whole transcriptome sequencing assays for endocrine sensitivity in metastatic breast cancer. Proccedings of San Antonio Breast Cancer Symposium, San Antonio, TX, USA, December 4-8, 2018

25. Marczyk M, Gunasekharan V, Wali VB, Shi W, Patwardhan G, Qing T, Pusztai L, Hatzis C: Targeting loss of isoenzyme diversity as a novel therapeutic strategy in breast cancer. Proccedings of San Antonio Breast Cancer Symposium, San Antonio, TX, USA, December 4-8, 2018

26. Tobiasz J., Polanska J., Biomarkers of breast cancer subtypes identified from RNA-Seq data. XXII Gliwice Scientific Meetings, Book of abstracts, p. 146. 16-17.11.2018, Gliwice, Poland

27. Comparison of tools for estimation of cancer sample contamination, PTBI 2018, Wrocław

28. Katarzyna Sieradzka, Andrzej Polański, Application of Gaussian mixture models to clonality analyzes in cancer genomics, PTBI2018, 5-7.09.2018, Wrocław, Poland

29. Michał Marczyk, Christos Hatzis, Joanna Polanska: Single-cell sequencing — new data, a new challenge. XI Symposium of the Polish Bioinformatics Society (PBS) PTBI 2018, September 5-7, 2018, Wrocław – plenary lecture, p.23

30. Justyna Mika, Wojciech Łabaj, Kinga Leszczorz, Katarzyna Sieradzka, Andrzej Polański, Comparison of tools for genetic variant detection from exome sequencing data, qbSS18, 11-25.06.2018, Houston, USA

31. Anna Papiez, Marcin Skrzypski, Amelia Szymanowska-Narloch, Ewa Jassem, Agnieszka Maciejewska, Ryszard Pawlowski, Rafal Dziadziuszko, Jacek Jassem, Witold Rzyman and Joanna Polanska: Can an integrative SNP approach substitute standard identification in comprehensive case/control analyses? In: Fdez-Riverola F., Mohamad M., Rocha M., De Paz J., Gonzalez P. (eds) 12th International Conference on Practical Applications of Computational Biology & Bioinformatics. PACBB 2018. Advances in Intelligent Systems and Computing, vol 803. p. 123-130 (2018) Springer, Cham ISBN:978-3-319-98701-9

32. G. O’Brien, L. Cruz Garcia, N. Brown, R. Finnon, J. Zyla, J. Polanska, C. Badie: Tracking Sfpi1/PU.1 and Kras mutations in murine acute myeloid leukaemia: role in radiation leukaemogenesis. European Radiation Research 2018, 44th Annual Meeting of the European Radiation Research Society, August 21-25, Pécs, Hungary

33. Michal Marczyk, Joanna Polanska, Andrzej Wojcik, Lovisa Lundholm: Radiation-induced miRNAs as biomarkers of exposure in peripherial blood leukocytes of breast cancer patients. 3rd European Radiological Protection Research Week, 1-5 October 2018, Rovinj-Rovigno, Croatia

34. Mika J, Yoshida K, Kusunoki Y, Candeias S, Polanska J: Does diversity of T cell receptors functionality depend on age and sex? Book of Abstracts, p.117, XII Annual q-bio Conference, Houston, TX, June 26-29, 2018

35. Maksym Walczak, Jakub Nalepa, Michal Kawulok, Wojciech Dudzik, Bogdan Smolka: Evolutionary cortical surface segmentation, Real-Time Image and Video Processing 2018, Orlando, Florida, United States 15 - 19 April 2018, ID:106700D

36. Polanska J: Methylation profiling in therapy related AML, Workshop on Advanced Analysis for. Understanding Rare Diseases. February 27th - March 1st, 2018, Shanghai, China

37. Binczyk F, Marczyk M, Polanska J: ADOLPH - system for Automated iDentification Of LymPHocytes in H-E stained tissue image. 2nd Annual Meeting of MAQC Society, Precision Medicine and Clinical Omics, February 24-27, 2018, Shanghai, China

38. Grzegorz Mrukwa, Dariusz Kuchta, Daniel Babiak, Sebastian Pustelnik, Michał Gallus, Maciej Gamrat, Robert Lisak, Michał Wolny, Wojciech Wilgierz, Joanna Polanska: Spectre - an open source tool for comprehensive Mass Spectrometry Imaging data analysis. 13th Annual Meeting of European Society of Molecular Imaging, EMIM 2018, March 20-23, 2018, San Sebastian, Spain

39. Robert Piecyk, Daniela Hladik, Soile Tapio, Joanna Polanska: Impact of sex and recovery time on the molecular profile of murine hippocampal tissue after irradiation, AGH International Student Conference: Knowledge, Technology and Society. 10-12 October 2018, Krakow, Poland

40. Tobiasz J., Al-Harbi N., Bin Judia S., Majid S., Alsbeih G., Polanska J., Mathematical modelling as a method of feature selection for radiosensitivity biomarkers identification. 1st Summer School of the Malopolska Centre of Biotechnology. 22-25.05.2018, Zakopane, Poland

41. Gawin M, Pietrowska M, Diehl HC, Mrukwa G, Kalinowska-Herok M, Chekan M, Elm J, Drazek G, Krawczyk A, Lange D, Polanska J, Henkel C, Widłak P: Obrazowanie molekularne MALDI-MSI w klasyfikacji raków tarczycy. III Zjazd Centrum Onkologii – Instytutu im. Marii Skłodowskiej-Curie. Perspektywy w onkologii molekularnej. 5-6.04.2018 Warszawa

42. Kula D, Kalemba M, Puch Z, Jarząb M, Kowalska M, Handkiewicz-Junak D, Halczok M, Tyszkiewicz T, Cyplińska R, Polanska J, Jarząb B: Związek wybranych polimorfizmów z rakiem brodawkowatym tarczycy. III Zjazd Centrum Onkologii – Instytutu im. Marii Skłodowskiej-Curie. Perspektywy w onkologii molekularnej. 5-6.04.2018 Warszawa

43. Gosławska Z, Jarosz-Chobot P, Szczepańska M, Szadkowska A, PiątkiewiczP, Bernas M, Polanska J, Chobot A: Ocena wiedzy dotyczącej cukrzycy wśród studentów ostatniego roku kierunku lekarskiego. XVI Konferencja Cukrzycy Typu 1 Sekcji Pediatrycznej Polskiego Towarzystwa Diabetologicznego, 12-14 kwietnia 2018, Łódź. Przegląd Pediatryczny, 47(1):31-32

44. Chobot A, Sokołowska M, Stompór J, Szyda K, Deja G, Polanska J, Jarosz-Chobot P: Okres remisji u dzieci z cukrzycą typu 1(T1DM) rozpoznaną w latach 2012-2013, 4-letnia obserwacja kliniczna. XVI Konferencja Cukrzycy Typu 1 Sekcji Pediatrycznej Polskiego Towarzystwa Diabetologicznego, 12-14 kwietnia 2018, Łódź. Przegląd Pediatryczny, 47(1):26-27

45. Chobot Agata, Janota Oliwia, Polanska Joanna, Pluskiewicz Wojciech: Jakość tkanki kostnej u młodzieży i młodych dorosłych z cukrzycą typu 1 w porównaniu z wynikami sprzed 10 lat. Przegląd Pediatryczny, 47(1):24; XVI Konferencja Cukrzycy Typu 1 Sekcji Pediatrycznej Polskiego Towarzystwa Diabetologicznego, 12-14 kwietnia 2018, Łódź.

46. Suwalska Aleksandra, Kocot Szymon, Binczyk Franciszek, Siuda Joanna, Bobek-Billewicz Barbara, Tarnawski Rafal, Polanska Joanna, Rudzinska-Bar Monika: Wykorzystanie konwolucyjnych sieci neuronowych do identyfikacji na obrazach MRI obszarów istotnych w diagnostyce zaburzeń funkcji poznawczych w przebiegu choroby Parkinsona. III Kongres Polskiego Towarzystwa Choroby Parkinsona i Innych Zaburzeń Ruchowych, Katowice 12-14 kwietnia 2018

47. Przemysława Jarosz-Chobot, Agata Chobot, Wojciech Fendler, Joanna Polanska, Eliza Skała: Epidemiology of diabetes mellitus in children and youth. Eds. Julian P. Velela, Corina Paul, Stuart J. Brink, in Pediatric Endocrinology and Diabetes, 2018 Update. Wydawnictwo Timisoara, Mirton 2018, str.99-116, ISBN 978-97-352-1799-0